Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lmcd1Q8VEE1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Lmcd1Q8VEE1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lmcd1Q8VEE1 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lmcd1Q8VEE1 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lmcd1Q8VEE1 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lmcd1Q8VEE1 Gm2272-201ENSMUST00000194903 582 ntBASIC16.69■□□□□ 0.26
Lmcd1Q8VEE1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Lmcd1Q8VEE1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lmcd1Q8VEE1 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lmcd1Q8VEE1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lmcd1Q8VEE1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lmcd1Q8VEE1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lmcd1Q8VEE1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Lmcd1Q8VEE1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lmcd1Q8VEE1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lmcd1Q8VEE1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Gm13453-201ENSMUST00000118708 357 ntBASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Gm7730-201ENSMUST00000212486 454 ntBASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lmcd1Q8VEE1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lmcd1Q8VEE1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Gm17837-201ENSMUST00000186435 985 ntBASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lmcd1Q8VEE1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.65■□□□□ 0.26
Lmcd1Q8VEE1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms