Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Gm4899-201ENSMUST00000178708 719 ntBASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx39aQ8VDW0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Ddx39aQ8VDW0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx39aQ8VDW0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Ddx39aQ8VDW0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.4■□□□□ 0.38
Ddx39aQ8VDW0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.4■□□□□ 0.38
Ddx39aQ8VDW0 Haglr-201ENSMUST00000100000 2085 ntBASIC17.4■□□□□ 0.38
Ddx39aQ8VDW0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx39aQ8VDW0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx39aQ8VDW0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Ddx39aQ8VDW0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx39aQ8VDW0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.4■□□□□ 0.38
Ddx39aQ8VDW0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx39aQ8VDW0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx39aQ8VDW0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx39aQ8VDW0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx39aQ8VDW0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx39aQ8VDW0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx39aQ8VDW0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ddx39aQ8VDW0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ddx39aQ8VDW0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Ddx39aQ8VDW0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Ddx39aQ8VDW0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ddx39aQ8VDW0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ddx39aQ8VDW0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Gm14822-201ENSMUST00000122247 291 ntBASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Gm27300-201ENSMUST00000184085 97 ntBASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Gm27335-201ENSMUST00000184758 97 ntBASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx39aQ8VDW0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms