Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Gm2651-201ENSMUST00000203560 838 ntBASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna3Q8R4G9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Mir5131-201ENSMUST00000175426 93 ntBASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna3Q8R4G9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Gm15173-201ENSMUST00000122049 433 ntBASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna3Q8R4G9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chrna3Q8R4G9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms