Protein–RNA interactions for Protein: Q8K0S9

Snapc1, snRNA-activating protein complex subunit 1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snapc1Q8K0S9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Snapc1Q8K0S9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Snapc1Q8K0S9 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Gm44711-201ENSMUST00000205414 1264 ntBASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Snapc1Q8K0S9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms