Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lin9Q8C735 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lin9Q8C735 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lin9Q8C735 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lin9Q8C735 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lin9Q8C735 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lin9Q8C735 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lin9Q8C735 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lin9Q8C735 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lin9Q8C735 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.15■□□□□ 0.34
Lin9Q8C735 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.15■□□□□ 0.34
Lin9Q8C735 Gm6376-201ENSMUST00000209407 580 ntBASIC17.15■□□□□ 0.34
Lin9Q8C735 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lin9Q8C735 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lin9Q8C735 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lin9Q8C735 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lin9Q8C735 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lin9Q8C735 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lin9Q8C735 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lin9Q8C735 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lin9Q8C735 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.14■□□□□ 0.33
Lin9Q8C735 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Lin9Q8C735 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.14■□□□□ 0.33
Lin9Q8C735 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.14■□□□□ 0.33
Lin9Q8C735 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Lin9Q8C735 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lin9Q8C735 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Lin9Q8C735 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.13■□□□□ 0.33
Lin9Q8C735 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.13■□□□□ 0.33
Lin9Q8C735 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.13■□□□□ 0.33
Lin9Q8C735 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.13■□□□□ 0.33
Lin9Q8C735 AW822252-206ENSMUST00000208904 237 ntBASIC17.13■□□□□ 0.33
Lin9Q8C735 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.13■□□□□ 0.33
Lin9Q8C735 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Lin9Q8C735 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Lin9Q8C735 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lin9Q8C735 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Lin9Q8C735 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Lin9Q8C735 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.12■□□□□ 0.33
Lin9Q8C735 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Lin9Q8C735 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.12■□□□□ 0.33
Lin9Q8C735 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Lin9Q8C735 Gm2651-201ENSMUST00000203560 838 ntBASIC17.12■□□□□ 0.33
Lin9Q8C735 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Lin9Q8C735 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Lin9Q8C735 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lin9Q8C735 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms