Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cpne1Q8C166 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.69□□□□□ -0.06
Cpne1Q8C166 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne1Q8C166 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cpne1Q8C166 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne1Q8C166 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne1Q8C166 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.69□□□□□ -0.06
Cpne1Q8C166 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne1Q8C166 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne1Q8C166 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpne1Q8C166 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Gm17971-201ENSMUST00000190239 806 ntBASIC14.68□□□□□ -0.06
Cpne1Q8C166 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.68□□□□□ -0.06
Cpne1Q8C166 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.68□□□□□ -0.06
Cpne1Q8C166 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpne1Q8C166 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.67□□□□□ -0.06
Cpne1Q8C166 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Gm34391-201ENSMUST00000203706 907 ntBASIC14.67□□□□□ -0.06
Cpne1Q8C166 Gm7506-201ENSMUST00000207758 815 ntBASIC14.67□□□□□ -0.06
Cpne1Q8C166 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.67□□□□□ -0.06
Cpne1Q8C166 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.67□□□□□ -0.06
Cpne1Q8C166 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpne1Q8C166 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne1Q8C166 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne1Q8C166 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne1Q8C166 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne1Q8C166 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne1Q8C166 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne1Q8C166 Prob1-201ENSMUST00000097619 3021 ntBASIC14.66□□□□□ -0.06
Cpne1Q8C166 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne1Q8C166 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne1Q8C166 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne1Q8C166 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne1Q8C166 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne1Q8C166 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne1Q8C166 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne1Q8C166 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Cpne1Q8C166 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.66□□□□□ -0.06
Cpne1Q8C166 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Cpne1Q8C166 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne1Q8C166 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cpne1Q8C166 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.66□□□□□ -0.06
Cpne1Q8C166 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne1Q8C166 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne1Q8C166 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpne1Q8C166 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms