Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Samm50Q8BGH2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Gm10052-201ENSMUST00000168019 960 ntBASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Gm7729-201ENSMUST00000050143 801 ntBASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Samm50Q8BGH2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.44■□□□□ 0.54
Samm50Q8BGH2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Samm50Q8BGH2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Samm50Q8BGH2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.44■□□□□ 0.54
Samm50Q8BGH2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Samm50Q8BGH2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Samm50Q8BGH2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Samm50Q8BGH2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Samm50Q8BGH2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.44■□□□□ 0.54
Samm50Q8BGH2 Gm27357-201ENSMUST00000183754 135 ntBASIC18.44■□□□□ 0.54
Samm50Q8BGH2 Gm36967-201ENSMUST00000193814 266 ntBASIC18.44■□□□□ 0.54
Samm50Q8BGH2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.44■□□□□ 0.54
Samm50Q8BGH2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Samm50Q8BGH2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Samm50Q8BGH2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Samm50Q8BGH2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Samm50Q8BGH2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Samm50Q8BGH2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Samm50Q8BGH2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Samm50Q8BGH2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Samm50Q8BGH2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Gm28033-201ENSMUST00000184224 96 ntBASIC18.42■□□□□ 0.54
Samm50Q8BGH2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Samm50Q8BGH2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Samm50Q8BGH2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Samm50Q8BGH2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Samm50Q8BGH2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Samm50Q8BGH2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Samm50Q8BGH2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Samm50Q8BGH2 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms