Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf40bQ80W14 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf40bQ80W14 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf40bQ80W14 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf40bQ80W14 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf40bQ80W14 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf40bQ80W14 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf40bQ80W14 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Prpf40bQ80W14 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Gm8655-201ENSMUST00000221159 852 ntBASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf40bQ80W14 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf40bQ80W14 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf40bQ80W14 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf40bQ80W14 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf40bQ80W14 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf40bQ80W14 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf40bQ80W14 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf40bQ80W14 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf40bQ80W14 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.08■□□□□ 0.48
Prpf40bQ80W14 Mir6956-201ENSMUST00000183598 62 ntBASIC18.08■□□□□ 0.48
Prpf40bQ80W14 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.08■□□□□ 0.48
Prpf40bQ80W14 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Prpf40bQ80W14 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf40bQ80W14 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf40bQ80W14 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf40bQ80W14 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Prpf40bQ80W14 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Prpf40bQ80W14 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf40bQ80W14 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf40bQ80W14 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf40bQ80W14 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf40bQ80W14 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf40bQ80W14 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.07■□□□□ 0.48
Prpf40bQ80W14 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms