Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.82■□□□□ 0.6
Sned1Q70E20 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sned1Q70E20 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sned1Q70E20 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sned1Q70E20 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sned1Q70E20 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sned1Q70E20 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sned1Q70E20 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.81■□□□□ 0.6
Sned1Q70E20 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sned1Q70E20 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.81■□□□□ 0.6
Sned1Q70E20 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
Sned1Q70E20 Mir7085-201ENSMUST00000184353 66 ntBASIC18.81■□□□□ 0.6
Sned1Q70E20 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.81■□□□□ 0.6
Sned1Q70E20 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.81■□□□□ 0.6
Sned1Q70E20 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sned1Q70E20 Gm6218-201ENSMUST00000219812 628 ntBASIC18.81■□□□□ 0.6
Sned1Q70E20 Gm6180-201ENSMUST00000065243 498 ntBASIC18.81■□□□□ 0.6
Sned1Q70E20 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sned1Q70E20 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sned1Q70E20 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sned1Q70E20 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sned1Q70E20 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sned1Q70E20 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sned1Q70E20 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sned1Q70E20 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Sned1Q70E20 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.8■□□□□ 0.6
Sned1Q70E20 Gm12138-201ENSMUST00000122180 951 ntBASIC18.8■□□□□ 0.6
Sned1Q70E20 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sned1Q70E20 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sned1Q70E20 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sned1Q70E20 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sned1Q70E20 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sned1Q70E20 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sned1Q70E20 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sned1Q70E20 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sned1Q70E20 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sned1Q70E20 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sned1Q70E20 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sned1Q70E20 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sned1Q70E20 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sned1Q70E20 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sned1Q70E20 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sned1Q70E20 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sned1Q70E20 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.79■□□□□ 0.6
Sned1Q70E20 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Sned1Q70E20 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.79■□□□□ 0.6
Sned1Q70E20 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sned1Q70E20 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sned1Q70E20 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sned1Q70E20 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sned1Q70E20 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sned1Q70E20 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Sned1Q70E20 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.78■□□□□ 0.6
Sned1Q70E20 Gm29667-201ENSMUST00000190817 490 ntBASIC18.78■□□□□ 0.6
Sned1Q70E20 Gm6745-201ENSMUST00000199216 526 ntBASIC18.78■□□□□ 0.6
Sned1Q70E20 Gm44719-201ENSMUST00000206404 149 ntBASIC18.78■□□□□ 0.6
Sned1Q70E20 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.78■□□□□ 0.6
Sned1Q70E20 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sned1Q70E20 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.78■□□□□ 0.6
Sned1Q70E20 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.78■□□□□ 0.6
Sned1Q70E20 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sned1Q70E20 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sned1Q70E20 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sned1Q70E20 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sned1Q70E20 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sned1Q70E20 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sned1Q70E20 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.77■□□□□ 0.6
Sned1Q70E20 Gm28631-201ENSMUST00000190740 334 ntBASIC18.77■□□□□ 0.6
Sned1Q70E20 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Sned1Q70E20 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sned1Q70E20 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sned1Q70E20 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sned1Q70E20 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sned1Q70E20 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sned1Q70E20 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sned1Q70E20 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Sned1Q70E20 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sned1Q70E20 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sned1Q70E20 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sned1Q70E20 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.76■□□□□ 0.59
Sned1Q70E20 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sned1Q70E20 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sned1Q70E20 Gm8515-201ENSMUST00000194852 576 ntBASIC18.76■□□□□ 0.59
Sned1Q70E20 Gm45059-201ENSMUST00000205558 1077 ntBASIC18.76■□□□□ 0.59
Sned1Q70E20 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sned1Q70E20 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sned1Q70E20 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sned1Q70E20 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sned1Q70E20 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.76■□□□□ 0.59
Sned1Q70E20 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.76■□□□□ 0.59
Sned1Q70E20 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.76■□□□□ 0.59
Sned1Q70E20 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sned1Q70E20 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sned1Q70E20 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sned1Q70E20 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sned1Q70E20 Gm22189-201ENSMUST00000103822 86 ntBASIC18.75■□□□□ 0.59
Sned1Q70E20 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18.75■□□□□ 0.59
Sned1Q70E20 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.75■□□□□ 0.59
Sned1Q70E20 Gm23984-201ENSMUST00000157139 203 ntBASIC18.75■□□□□ 0.59
Sned1Q70E20 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms