Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Asic1-205ENSMUST00000228185 1818 ntBASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.46■□□□□ 0.23
Lsm8Q6ZWM4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Lsm8Q6ZWM4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Lsm8Q6ZWM4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Gm9103-201ENSMUST00000119371 405 ntBASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm8Q6ZWM4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Gm8097-201ENSMUST00000117903 829 ntBASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm8Q6ZWM4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm8Q6ZWM4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm8Q6ZWM4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm8Q6ZWM4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm8Q6ZWM4 Gm14722-201ENSMUST00000118943 689 ntBASIC16.43■□□□□ 0.22
Lsm8Q6ZWM4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.43■□□□□ 0.22
Lsm8Q6ZWM4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm8Q6ZWM4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms