Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 KRT18P41-201ENST00000518924 1277 ntBASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.95■□□□□ 0.78
CNKSR3Q6P9H4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 LINC01521-201ENST00000504184 1943 ntBASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 AC073648.2-201ENST00000510116 352 ntBASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 AC092865.5-201ENST00000545435 363 ntBASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 AL157384.1-201ENST00000445995 2473 ntBASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 HEIH-201ENST00000623091 1652 ntBASIC19.94■□□□□ 0.78
CNKSR3Q6P9H4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 AC113404.2-201ENST00000507884 177 ntBASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 POLD2P1-201ENST00000511220 997 ntBASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 AC139887.3-201ENST00000568585 713 ntBASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 AC008687.5-201ENST00000593746 558 ntBASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 MIR7706-201ENST00000613747 67 ntBASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 AL355877.3-201ENST00000622820 899 ntBASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNKSR3Q6P9H4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.92■□□□□ 0.78
CNKSR3Q6P9H4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 RCN1P2-201ENST00000398357 915 ntBASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 MIR1233-2-201ENST00000408138 82 ntBASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 MIR1233-1-201ENST00000408722 82 ntBASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 RBM17P3-201ENST00000417687 1192 ntBASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.91■□□□□ 0.78
CNKSR3Q6P9H4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms