Protein–RNA interactions for Protein: Q6AW69

Cgnl1, Cingulin-like protein 1, mousemouse

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgnl1Q6AW69 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.33■□□□□ 0.68
Cgnl1Q6AW69 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cgnl1Q6AW69 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cgnl1Q6AW69 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cgnl1Q6AW69 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19.33■□□□□ 0.68
Cgnl1Q6AW69 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cgnl1Q6AW69 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cgnl1Q6AW69 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cgnl1Q6AW69 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cgnl1Q6AW69 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cgnl1Q6AW69 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cgnl1Q6AW69 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cgnl1Q6AW69 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cgnl1Q6AW69 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Gm7367-201ENSMUST00000057611 492 ntBASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cgnl1Q6AW69 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgnl1Q6AW69 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cgnl1Q6AW69 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.29■□□□□ 0.68
Cgnl1Q6AW69 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cgnl1Q6AW69 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cgnl1Q6AW69 Gm15165-201ENSMUST00000118140 502 ntBASIC19.29■□□□□ 0.68
Cgnl1Q6AW69 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cgnl1Q6AW69 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cgnl1Q6AW69 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.29■□□□□ 0.68
Cgnl1Q6AW69 Gm33142-201ENSMUST00000193913 867 ntBASIC19.29■□□□□ 0.68
Cgnl1Q6AW69 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cgnl1Q6AW69 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cgnl1Q6AW69 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Cgnl1Q6AW69 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cgnl1Q6AW69 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cgnl1Q6AW69 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cgnl1Q6AW69 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cgnl1Q6AW69 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms