Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Ccne1Q61457 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccne1Q61457 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ccne1Q61457 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ccne1Q61457 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccne1Q61457 Gm44335-201ENSMUST00000196879 141 ntBASIC20.35■□□□□ 0.85
Ccne1Q61457 Gm44297-201ENSMUST00000198304 141 ntBASIC20.35■□□□□ 0.85
Ccne1Q61457 Gm44346-201ENSMUST00000198851 141 ntBASIC20.35■□□□□ 0.85
Ccne1Q61457 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccne1Q61457 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Ccne1Q61457 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ccne1Q61457 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccne1Q61457 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccne1Q61457 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Ccne1Q61457 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccne1Q61457 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccne1Q61457 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.34■□□□□ 0.85
Ccne1Q61457 Nrn1-204ENSMUST00000224323 1779 ntBASIC20.34■□□□□ 0.85
Ccne1Q61457 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccne1Q61457 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccne1Q61457 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccne1Q61457 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccne1Q61457 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Ccne1Q61457 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC20.34■□□□□ 0.85
Ccne1Q61457 Gm11745-201ENSMUST00000121669 448 ntBASIC20.34■□□□□ 0.85
Ccne1Q61457 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccne1Q61457 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccne1Q61457 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccne1Q61457 Gm44729-201ENSMUST00000206759 2052 ntBASIC20.34■□□□□ 0.85
Ccne1Q61457 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccne1Q61457 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccne1Q61457 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccne1Q61457 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccne1Q61457 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.34■□□□□ 0.85
Ccne1Q61457 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccne1Q61457 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.34■□□□□ 0.85
Ccne1Q61457 Prkcz2-201ENSMUST00000206136 1756 ntBASIC20.34■□□□□ 0.85
Ccne1Q61457 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccne1Q61457 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccne1Q61457 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Ccne1Q61457 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccne1Q61457 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Ccne1Q61457 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccne1Q61457 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Ccne1Q61457 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccne1Q61457 Gm11453-201ENSMUST00000117318 1007 ntBASIC20.33■□□□□ 0.85
Ccne1Q61457 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccne1Q61457 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Ccne1Q61457 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccne1Q61457 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.84
Ccne1Q61457 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccne1Q61457 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccne1Q61457 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccne1Q61457 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccne1Q61457 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccne1Q61457 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ccne1Q61457 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccne1Q61457 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccne1Q61457 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Ccne1Q61457 Gm37171-201ENSMUST00000192636 1185 ntBASIC20.32■□□□□ 0.84
Ccne1Q61457 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.32■□□□□ 0.84
Ccne1Q61457 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ccne1Q61457 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.32■□□□□ 0.84
Ccne1Q61457 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccne1Q61457 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccne1Q61457 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccne1Q61457 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccne1Q61457 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccne1Q61457 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccne1Q61457 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccne1Q61457 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccne1Q61457 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccne1Q61457 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccne1Q61457 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccne1Q61457 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccne1Q61457 Gm13616-201ENSMUST00000120600 222 ntBASIC20.31■□□□□ 0.84
Ccne1Q61457 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC20.31■□□□□ 0.84
Ccne1Q61457 Gm8318-201ENSMUST00000182954 872 ntBASIC20.31■□□□□ 0.84
Ccne1Q61457 Mir6956-201ENSMUST00000183598 62 ntBASIC20.31■□□□□ 0.84
Ccne1Q61457 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccne1Q61457 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ccne1Q61457 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.31■□□□□ 0.84
Ccne1Q61457 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Ccne1Q61457 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccne1Q61457 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ccne1Q61457 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccne1Q61457 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccne1Q61457 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccne1Q61457 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms