Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim38Q5SZ99 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim38Q5SZ99 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Gm14859-201ENSMUST00000117752 357 ntBASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Gm15165-201ENSMUST00000118140 502 ntBASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Gm27357-201ENSMUST00000183754 135 ntBASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim38Q5SZ99 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms