Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Gm12350-201ENSMUST00000121208 462 ntBASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 AV026068-213ENSMUST00000223675 1171 ntBASIC12.54□□□□□ -0.4
Trav2Q5R1I9 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav2Q5R1I9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav2Q5R1I9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav2Q5R1I9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav2Q5R1I9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav2Q5R1I9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav2Q5R1I9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav2Q5R1I9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav2Q5R1I9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav2Q5R1I9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav2Q5R1I9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav2Q5R1I9 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms