Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Olfr129-201ENSMUST00000122318 993 ntBASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Gm27742-201ENSMUST00000184667 60 ntBASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5d-4Q5R1F6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Trav5d-4Q5R1F6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trav5d-4Q5R1F6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5d-4Q5R1F6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5d-4Q5R1F6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav5d-4Q5R1F6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Trav5d-4Q5R1F6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5d-4Q5R1F6 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Gm13312-201ENSMUST00000119631 718 ntBASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Gm27704-201ENSMUST00000185094 107 ntBASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav5d-4Q5R1F6 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Trav5d-4Q5R1F6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms