Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h1Q4VGL6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h1Q4VGL6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h1Q4VGL6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h1Q4VGL6 Gm9682-201ENSMUST00000197505 556 ntBASIC18.11■□□□□ 0.49
Rc3h1Q4VGL6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.11■□□□□ 0.49
Rc3h1Q4VGL6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h1Q4VGL6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h1Q4VGL6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h1Q4VGL6 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.11■□□□□ 0.49
Rc3h1Q4VGL6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h1Q4VGL6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h1Q4VGL6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h1Q4VGL6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h1Q4VGL6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h1Q4VGL6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h1Q4VGL6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rc3h1Q4VGL6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rc3h1Q4VGL6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h1Q4VGL6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h1Q4VGL6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h1Q4VGL6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h1Q4VGL6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h1Q4VGL6 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.09■□□□□ 0.49
Rc3h1Q4VGL6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h1Q4VGL6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h1Q4VGL6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h1Q4VGL6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h1Q4VGL6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h1Q4VGL6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h1Q4VGL6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h1Q4VGL6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.09■□□□□ 0.49
Rc3h1Q4VGL6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rc3h1Q4VGL6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h1Q4VGL6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rc3h1Q4VGL6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rc3h1Q4VGL6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rc3h1Q4VGL6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rc3h1Q4VGL6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rc3h1Q4VGL6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rc3h1Q4VGL6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.08■□□□□ 0.49
Rc3h1Q4VGL6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.08■□□□□ 0.49
Rc3h1Q4VGL6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rc3h1Q4VGL6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms