Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp48Q3V0C5 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Gm8396-201ENSMUST00000057361 823 ntBASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Usp48Q3V0C5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Usp48Q3V0C5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp48Q3V0C5 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Gm44945-201ENSMUST00000206764 1187 ntBASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp48Q3V0C5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Gm9172-201ENSMUST00000212092 954 ntBASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms