Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col10a1Q05306 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 Gm7153-201ENSMUST00000117092 455 ntBASIC14.49□□□□□ -0.09
Col10a1Q05306 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 Gm12497-201ENSMUST00000138778 237 ntBASIC14.49□□□□□ -0.09
Col10a1Q05306 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col10a1Q05306 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Col10a1Q05306 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Col10a1Q05306 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Col10a1Q05306 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Col10a1Q05306 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Col10a1Q05306 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.48□□□□□ -0.09
Col10a1Q05306 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.48□□□□□ -0.09
Col10a1Q05306 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.48□□□□□ -0.09
Col10a1Q05306 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.48□□□□□ -0.09
Col10a1Q05306 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.48□□□□□ -0.09
Col10a1Q05306 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Col10a1Q05306 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col10a1Q05306 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Col10a1Q05306 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.48□□□□□ -0.09
Col10a1Q05306 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.48□□□□□ -0.09
Col10a1Q05306 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Col10a1Q05306 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col10a1Q05306 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Col10a1Q05306 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.47□□□□□ -0.09
Col10a1Q05306 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.47□□□□□ -0.09
Col10a1Q05306 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.47□□□□□ -0.09
Col10a1Q05306 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Col10a1Q05306 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.47□□□□□ -0.09
Col10a1Q05306 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Col10a1Q05306 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Col10a1Q05306 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col10a1Q05306 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col10a1Q05306 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col10a1Q05306 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col10a1Q05306 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Col10a1Q05306 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col10a1Q05306 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Col10a1Q05306 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col10a1Q05306 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col10a1Q05306 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col10a1Q05306 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col10a1Q05306 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.46□□□□□ -0.09
Col10a1Q05306 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms