Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.89■□□□□ 0.13
ThraP63058 Asic1-205ENSMUST00000228185 1818 ntBASIC15.89■□□□□ 0.13
ThraP63058 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.89■□□□□ 0.13
ThraP63058 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
ThraP63058 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.89■□□□□ 0.13
ThraP63058 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.89■□□□□ 0.13
ThraP63058 Gm6443-201ENSMUST00000203599 874 ntBASIC15.89■□□□□ 0.13
ThraP63058 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
ThraP63058 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
ThraP63058 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.89■□□□□ 0.13
ThraP63058 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
ThraP63058 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
ThraP63058 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ThraP63058 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
ThraP63058 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
ThraP63058 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.88■□□□□ 0.13
ThraP63058 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.88■□□□□ 0.13
ThraP63058 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Gm44430-201ENSMUST00000203376 995 ntBASIC15.88■□□□□ 0.13
ThraP63058 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.88■□□□□ 0.13
ThraP63058 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.88■□□□□ 0.13
ThraP63058 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
ThraP63058 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.88■□□□□ 0.13
ThraP63058 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
ThraP63058 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ThraP63058 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ThraP63058 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ThraP63058 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ThraP63058 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ThraP63058 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ThraP63058 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
ThraP63058 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ThraP63058 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ThraP63058 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ThraP63058 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ThraP63058 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ThraP63058 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ThraP63058 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.87■□□□□ 0.13
ThraP63058 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ThraP63058 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.87■□□□□ 0.13
ThraP63058 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ThraP63058 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ThraP63058 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.87■□□□□ 0.13
ThraP63058 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
ThraP63058 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ThraP63058 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ThraP63058 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ThraP63058 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ThraP63058 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ThraP63058 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
ThraP63058 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ThraP63058 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ThraP63058 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ThraP63058 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ThraP63058 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ThraP63058 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
ThraP63058 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ThraP63058 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ThraP63058 Gm18195-201ENSMUST00000207604 706 ntBASIC15.86■□□□□ 0.13
ThraP63058 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.86■□□□□ 0.13
ThraP63058 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ThraP63058 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms