Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.01■□□□□ 0.15
Sox1P53783 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Sox1P53783 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.01■□□□□ 0.15
Sox1P53783 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox1P53783 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Sox1P53783 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16■□□□□ 0.15
Sox1P53783 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16■□□□□ 0.15
Sox1P53783 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Sox1P53783 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Sox1P53783 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox1P53783 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox1P53783 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox1P53783 Gm8410-201ENSMUST00000117225 605 ntBASIC16■□□□□ 0.15
Sox1P53783 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sox1P53783 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16■□□□□ 0.15
Sox1P53783 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sox1P53783 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sox1P53783 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16■□□□□ 0.15
Sox1P53783 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16■□□□□ 0.15
Sox1P53783 Gm6218-201ENSMUST00000219812 628 ntBASIC16■□□□□ 0.15
Sox1P53783 AC122024.2-201ENSMUST00000220086 871 ntBASIC16■□□□□ 0.15
Sox1P53783 AC166341.4-201ENSMUST00000220625 123 ntBASIC16■□□□□ 0.15
Sox1P53783 Gm9063-201ENSMUST00000223299 582 ntBASIC16■□□□□ 0.15
Sox1P53783 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16■□□□□ 0.15
Sox1P53783 Gm29361-201ENSMUST00000183323 2000 ntBASIC16■□□□□ 0.15
Sox1P53783 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16■□□□□ 0.15
Sox1P53783 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Sox1P53783 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sox1P53783 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox1P53783 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Sox1P53783 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox1P53783 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox1P53783 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox1P53783 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox1P53783 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
Sox1P53783 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sox1P53783 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Sox1P53783 Gm6266-201ENSMUST00000203844 806 ntBASIC15.99■□□□□ 0.15
Sox1P53783 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox1P53783 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox1P53783 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sox1P53783 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox1P53783 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Sox1P53783 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox1P53783 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox1P53783 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sox1P53783 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox1P53783 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sox1P53783 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox1P53783 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox1P53783 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.98■□□□□ 0.15
Sox1P53783 Grk6-207ENSMUST00000225925 2769 ntBASIC15.98■□□□□ 0.15
Sox1P53783 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.98■□□□□ 0.15
Sox1P53783 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox1P53783 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox1P53783 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sox1P53783 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox1P53783 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox1P53783 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sox1P53783 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox1P53783 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.97■□□□□ 0.15
Sox1P53783 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Sox1P53783 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.97■□□□□ 0.15
Sox1P53783 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox1P53783 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sox1P53783 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Sox1P53783 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sox1P53783 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox1P53783 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox1P53783 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox1P53783 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox1P53783 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox1P53783 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox1P53783 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms