Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.44■□□□□ 0.86
ACLYP53396 LINC01521-201ENST00000504184 1943 ntBASIC20.44■□□□□ 0.86
ACLYP53396 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.44■□□□□ 0.86
ACLYP53396 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACLYP53396 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
ACLYP53396 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.44■□□□□ 0.86
ACLYP53396 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.43■□□□□ 0.86
ACLYP53396 AL357033.4-201ENST00000617703 1807 ntBASIC20.43■□□□□ 0.86
ACLYP53396 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
ACLYP53396 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.43■□□□□ 0.86
ACLYP53396 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.43■□□□□ 0.86
ACLYP53396 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACLYP53396 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.43■□□□□ 0.86
ACLYP53396 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACLYP53396 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ACLYP53396 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ACLYP53396 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ACLYP53396 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACLYP53396 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACLYP53396 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACLYP53396 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.43■□□□□ 0.86
ACLYP53396 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.43■□□□□ 0.86
ACLYP53396 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ACLYP53396 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.43■□□□□ 0.86
ACLYP53396 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ACLYP53396 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACLYP53396 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ACLYP53396 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ACLYP53396 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ACLYP53396 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
ACLYP53396 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.43■□□□□ 0.86
ACLYP53396 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.43■□□□□ 0.86
ACLYP53396 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACLYP53396 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ACLYP53396 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACLYP53396 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ACLYP53396 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ACLYP53396 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.43■□□□□ 0.86
ACLYP53396 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.42■□□□□ 0.86
ACLYP53396 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACLYP53396 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACLYP53396 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACLYP53396 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.42■□□□□ 0.86
ACLYP53396 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ACLYP53396 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
ACLYP53396 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACLYP53396 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.42■□□□□ 0.86
ACLYP53396 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.42■□□□□ 0.86
ACLYP53396 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.42■□□□□ 0.86
ACLYP53396 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.42■□□□□ 0.86
ACLYP53396 AL049840.3-201ENST00000602669 611 ntBASIC20.42■□□□□ 0.86
ACLYP53396 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.42■□□□□ 0.86
ACLYP53396 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ACLYP53396 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
ACLYP53396 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.42■□□□□ 0.86
ACLYP53396 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACLYP53396 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.42■□□□□ 0.86
ACLYP53396 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.42■□□□□ 0.86
ACLYP53396 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACLYP53396 AC125437.2-201ENST00000625180 2167 ntBASIC20.42■□□□□ 0.86
ACLYP53396 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACLYP53396 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACLYP53396 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACLYP53396 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ACLYP53396 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACLYP53396 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
ACLYP53396 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACLYP53396 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
ACLYP53396 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACLYP53396 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACLYP53396 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
ACLYP53396 MIR1233-2-201ENST00000408138 82 ntBASIC20.41■□□□□ 0.86
ACLYP53396 MIR1233-1-201ENST00000408722 82 ntBASIC20.41■□□□□ 0.86
ACLYP53396 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ACLYP53396 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.41■□□□□ 0.86
ACLYP53396 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.41■□□□□ 0.86
ACLYP53396 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ACLYP53396 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ACLYP53396 RPL13AP23-201ENST00000480739 586 ntBASIC20.41■□□□□ 0.86
ACLYP53396 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.41■□□□□ 0.86
ACLYP53396 AC139887.3-201ENST00000568585 713 ntBASIC20.41■□□□□ 0.86
ACLYP53396 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.41■□□□□ 0.86
ACLYP53396 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
ACLYP53396 TERC-201ENST00000602385 541 ntBASIC20.41■□□□□ 0.86
ACLYP53396 MIR7706-201ENST00000613747 67 ntBASIC20.41■□□□□ 0.86
ACLYP53396 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
ACLYP53396 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ACLYP53396 PMS2P7-201ENST00000506558 1336 ntBASIC20.41■□□□□ 0.86
ACLYP53396 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACLYP53396 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
ACLYP53396 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.41■□□□□ 0.86
ACLYP53396 AL163051.1-201ENST00000569214 1512 ntBASIC20.41■□□□□ 0.86
ACLYP53396 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.41■□□□□ 0.86
ACLYP53396 AC141586.3-201ENST00000562166 1838 ntBASIC20.41■□□□□ 0.86
ACLYP53396 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.41■□□□□ 0.86
ACLYP53396 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACLYP53396 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACLYP53396 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.41■□□□□ 0.86
ACLYP53396 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACLYP53396 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms