Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RoraP51448 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RoraP51448 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RoraP51448 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.83□□□□□ -0.04
RoraP51448 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RoraP51448 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RoraP51448 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RoraP51448 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RoraP51448 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RoraP51448 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RoraP51448 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RoraP51448 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RoraP51448 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RoraP51448 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RoraP51448 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.82□□□□□ -0.04
RoraP51448 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RoraP51448 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.82□□□□□ -0.04
RoraP51448 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.82□□□□□ -0.04
RoraP51448 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.82□□□□□ -0.04
RoraP51448 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
RoraP51448 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RoraP51448 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.82□□□□□ -0.04
RoraP51448 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RoraP51448 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RoraP51448 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.81□□□□□ -0.04
RoraP51448 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RoraP51448 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
RoraP51448 Gm27646-201ENSMUST00000183989 110 ntBASIC14.81□□□□□ -0.04
RoraP51448 Gm8000-201ENSMUST00000188378 592 ntBASIC14.81□□□□□ -0.04
RoraP51448 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.81□□□□□ -0.04
RoraP51448 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.81□□□□□ -0.04
RoraP51448 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.81□□□□□ -0.04
RoraP51448 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.81□□□□□ -0.04
RoraP51448 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RoraP51448 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.81□□□□□ -0.04
RoraP51448 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.81□□□□□ -0.04
RoraP51448 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RoraP51448 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RoraP51448 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.81□□□□□ -0.04
RoraP51448 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RoraP51448 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.8□□□□□ -0.04
RoraP51448 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RoraP51448 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
RoraP51448 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RoraP51448 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RoraP51448 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RoraP51448 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RoraP51448 Gm11779-201ENSMUST00000118541 368 ntBASIC14.8□□□□□ -0.04
RoraP51448 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms