Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Xcl1P47993 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Xcl1P47993 Gm18755-201ENSMUST00000218030 1099 ntBASIC10.27□□□□□ -0.77
Xcl1P47993 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Xcl1P47993 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Xcl1P47993 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Xcl1P47993 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Xcl1P47993 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Xcl1P47993 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Xcl1P47993 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC10.26□□□□□ -0.77
Xcl1P47993 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC10.26□□□□□ -0.77
Xcl1P47993 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Xcl1P47993 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Gm9847-201ENSMUST00000052528 599 ntBASIC10.26□□□□□ -0.77
Xcl1P47993 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC10.26□□□□□ -0.77
Xcl1P47993 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.26□□□□□ -0.77
Xcl1P47993 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Xcl1P47993 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Xcl1P47993 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Xcl1P47993 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Xcl1P47993 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.25□□□□□ -0.77
Xcl1P47993 Gm5357-201ENSMUST00000212720 1924 ntBASIC10.25□□□□□ -0.77
Xcl1P47993 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Xcl1P47993 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Xcl1P47993 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Xcl1P47993 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.25□□□□□ -0.77
Xcl1P47993 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Xcl1P47993 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.25□□□□□ -0.77
Xcl1P47993 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.25□□□□□ -0.77
Xcl1P47993 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Xcl1P47993 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Xcl1P47993 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Xcl1P47993 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Xcl1P47993 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Xcl1P47993 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.25□□□□□ -0.77
Xcl1P47993 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Xcl1P47993 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Xcl1P47993 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Xcl1P47993 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Xcl1P47993 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC10.25□□□□□ -0.77
Xcl1P47993 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Xcl1P47993 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Xcl1P47993 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Xcl1P47993 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Xcl1P47993 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Xcl1P47993 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Xcl1P47993 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Xcl1P47993 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC10.24□□□□□ -0.77
Xcl1P47993 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Xcl1P47993 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Xcl1P47993 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Xcl1P47993 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Xcl1P47993 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Xcl1P47993 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Xcl1P47993 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms