Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sdc2P43407 Gm6257-201ENSMUST00000163864 910 ntBASIC17.64■□□□□ 0.41
Sdc2P43407 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.64■□□□□ 0.41
Sdc2P43407 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc2P43407 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc2P43407 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc2P43407 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc2P43407 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc2P43407 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc2P43407 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc2P43407 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.64■□□□□ 0.41
Sdc2P43407 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sdc2P43407 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc2P43407 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc2P43407 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc2P43407 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc2P43407 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc2P43407 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc2P43407 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Sdc2P43407 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Sdc2P43407 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc2P43407 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc2P43407 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc2P43407 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Sdc2P43407 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc2P43407 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc2P43407 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc2P43407 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.63■□□□□ 0.41
Sdc2P43407 Gm11950-201ENSMUST00000121615 838 ntBASIC17.63■□□□□ 0.41
Sdc2P43407 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc2P43407 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc2P43407 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc2P43407 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc2P43407 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc2P43407 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc2P43407 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc2P43407 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc2P43407 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc2P43407 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc2P43407 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc2P43407 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc2P43407 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.62■□□□□ 0.41
Sdc2P43407 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc2P43407 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sdc2P43407 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc2P43407 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc2P43407 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Sdc2P43407 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc2P43407 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Sdc2P43407 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc2P43407 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc2P43407 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.62■□□□□ 0.41
Sdc2P43407 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc2P43407 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc2P43407 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc2P43407 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc2P43407 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Sdc2P43407 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.61■□□□□ 0.41
Sdc2P43407 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.61■□□□□ 0.41
Sdc2P43407 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Sdc2P43407 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sdc2P43407 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Sdc2P43407 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.61■□□□□ 0.41
Sdc2P43407 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc2P43407 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.6■□□□□ 0.41
Sdc2P43407 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.6■□□□□ 0.41
Sdc2P43407 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms