Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cd40lgP27548 Gm15372-201ENSMUST00000120729 834 ntBASIC14.48□□□□□ -0.09
Cd40lgP27548 Gm17971-201ENSMUST00000190239 806 ntBASIC14.48□□□□□ -0.09
Cd40lgP27548 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.48□□□□□ -0.09
Cd40lgP27548 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.48□□□□□ -0.09
Cd40lgP27548 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Cd40lgP27548 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd40lgP27548 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cd40lgP27548 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd40lgP27548 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cd40lgP27548 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd40lgP27548 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd40lgP27548 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd40lgP27548 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cd40lgP27548 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.47□□□□□ -0.09
Cd40lgP27548 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cd40lgP27548 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cd40lgP27548 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.47□□□□□ -0.09
Cd40lgP27548 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.47□□□□□ -0.09
Cd40lgP27548 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.47□□□□□ -0.09
Cd40lgP27548 Gm15165-201ENSMUST00000118140 502 ntBASIC14.47□□□□□ -0.09
Cd40lgP27548 Gm12644-201ENSMUST00000119935 606 ntBASIC14.47□□□□□ -0.09
Cd40lgP27548 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.47□□□□□ -0.09
Cd40lgP27548 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Cd40lgP27548 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Cd40lgP27548 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Cd40lgP27548 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.47□□□□□ -0.09
Cd40lgP27548 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.47□□□□□ -0.09
Cd40lgP27548 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.47□□□□□ -0.09
Cd40lgP27548 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cd40lgP27548 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cd40lgP27548 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd40lgP27548 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cd40lgP27548 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd40lgP27548 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd40lgP27548 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd40lgP27548 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd40lgP27548 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.46□□□□□ -0.09
Cd40lgP27548 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Cd40lgP27548 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.46□□□□□ -0.09
Cd40lgP27548 Gm27741-201ENSMUST00000185060 237 ntBASIC14.46□□□□□ -0.09
Cd40lgP27548 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.46□□□□□ -0.09
Cd40lgP27548 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd40lgP27548 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd40lgP27548 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cd40lgP27548 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cd40lgP27548 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cd40lgP27548 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cd40lgP27548 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Cd40lgP27548 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cd40lgP27548 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cd40lgP27548 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cd40lgP27548 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cd40lgP27548 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cd40lgP27548 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cd40lgP27548 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cd40lgP27548 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd40lgP27548 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cd40lgP27548 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd40lgP27548 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd40lgP27548 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd40lgP27548 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd40lgP27548 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd40lgP27548 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd40lgP27548 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd40lgP27548 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd40lgP27548 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd40lgP27548 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd40lgP27548 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cd40lgP27548 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cd40lgP27548 Gm43347-201ENSMUST00000200226 580 ntBASIC14.45□□□□□ -0.1
Cd40lgP27548 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.45□□□□□ -0.1
Cd40lgP27548 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Cd40lgP27548 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd40lgP27548 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd40lgP27548 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd40lgP27548 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd40lgP27548 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cd40lgP27548 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms