Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfi1bO70237 Gm27463-201ENSMUST00000183569 57 ntBASIC13.17□□□□□ -0.3
Gfi1bO70237 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfi1bO70237 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gfi1bO70237 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfi1bO70237 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gfi1bO70237 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfi1bO70237 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gfi1bO70237 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfi1bO70237 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gfi1bO70237 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfi1bO70237 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gfi1bO70237 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfi1bO70237 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Gfi1bO70237 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gfi1bO70237 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.16□□□□□ -0.3
Gfi1bO70237 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.16□□□□□ -0.3
Gfi1bO70237 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.16□□□□□ -0.3
Gfi1bO70237 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Gfi1bO70237 Gm9731-201ENSMUST00000209480 747 ntBASIC13.16□□□□□ -0.3
Gfi1bO70237 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Gfi1bO70237 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gfi1bO70237 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gfi1bO70237 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Gfi1bO70237 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.16□□□□□ -0.3
Gfi1bO70237 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfi1bO70237 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Gfi1bO70237 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Gfi1bO70237 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.15□□□□□ -0.3
Gfi1bO70237 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Gfi1bO70237 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.15□□□□□ -0.3
Gfi1bO70237 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.15□□□□□ -0.3
Gfi1bO70237 Gm11539-201ENSMUST00000119837 557 ntBASIC13.15□□□□□ -0.3
Gfi1bO70237 Gm13436-201ENSMUST00000120418 567 ntBASIC13.15□□□□□ -0.3
Gfi1bO70237 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.15□□□□□ -0.3
Gfi1bO70237 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Gfi1bO70237 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.15□□□□□ -0.3
Gfi1bO70237 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Gfi1bO70237 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfi1bO70237 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Gfi1bO70237 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.15□□□□□ -0.31
Gfi1bO70237 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gfi1bO70237 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.14□□□□□ -0.31
Gfi1bO70237 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gfi1bO70237 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Gfi1bO70237 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gfi1bO70237 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gfi1bO70237 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Gfi1bO70237 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gfi1bO70237 Gm17661-201ENSMUST00000170317 270 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms