Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per2O54943 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
Per2O54943 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.38■□□□□ 0.21
Per2O54943 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Per2O54943 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.38■□□□□ 0.21
Per2O54943 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per2O54943 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per2O54943 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per2O54943 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per2O54943 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per2O54943 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per2O54943 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Per2O54943 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per2O54943 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.38■□□□□ 0.21
Per2O54943 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Per2O54943 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.37■□□□□ 0.21
Per2O54943 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Per2O54943 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.37■□□□□ 0.21
Per2O54943 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.37■□□□□ 0.21
Per2O54943 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Per2O54943 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.37■□□□□ 0.21
Per2O54943 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.37■□□□□ 0.21
Per2O54943 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Per2O54943 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Per2O54943 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Per2O54943 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Per2O54943 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Per2O54943 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per2O54943 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per2O54943 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per2O54943 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per2O54943 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per2O54943 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per2O54943 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per2O54943 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.36■□□□□ 0.21
Per2O54943 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per2O54943 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per2O54943 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per2O54943 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.36■□□□□ 0.21
Per2O54943 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per2O54943 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Per2O54943 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per2O54943 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per2O54943 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Per2O54943 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Per2O54943 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Per2O54943 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Per2O54943 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Per2O54943 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Per2O54943 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.35■□□□□ 0.21
Per2O54943 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Per2O54943 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Per2O54943 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Per2O54943 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.35■□□□□ 0.21
Per2O54943 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.35■□□□□ 0.21
Per2O54943 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.35■□□□□ 0.21
Per2O54943 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Per2O54943 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.35■□□□□ 0.21
Per2O54943 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Per2O54943 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Per2O54943 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per2O54943 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms