Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.76□□□□□ -0.05
Cx3cl1O35188 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.76□□□□□ -0.05
Cx3cl1O35188 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.76□□□□□ -0.05
Cx3cl1O35188 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cx3cl1O35188 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Gm12497-201ENSMUST00000138778 237 ntBASIC14.75□□□□□ -0.05
Cx3cl1O35188 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cx3cl1O35188 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Gm4459-201ENSMUST00000118750 468 ntBASIC14.74□□□□□ -0.05
Cx3cl1O35188 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.74□□□□□ -0.05
Cx3cl1O35188 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cx3cl1O35188 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms