Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn7aB1AYL1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn7aB1AYL1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Scn7aB1AYL1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn7aB1AYL1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn7aB1AYL1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC20.08■□□□□ 0.81
Scn7aB1AYL1 Gm14026-201ENSMUST00000120625 1789 ntBASIC20.08■□□□□ 0.81
Scn7aB1AYL1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn7aB1AYL1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn7aB1AYL1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn7aB1AYL1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn7aB1AYL1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC20.08■□□□□ 0.81
Scn7aB1AYL1 Gm12017-201ENSMUST00000122453 1003 ntBASIC20.08■□□□□ 0.81
Scn7aB1AYL1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC20.08■□□□□ 0.81
Scn7aB1AYL1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn7aB1AYL1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn7aB1AYL1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn7aB1AYL1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn7aB1AYL1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Gm16026-204ENSMUST00000162652 683 ntBASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn7aB1AYL1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn7aB1AYL1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn7aB1AYL1 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Scn7aB1AYL1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn7aB1AYL1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn7aB1AYL1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn7aB1AYL1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Scn7aB1AYL1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn7aB1AYL1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn7aB1AYL1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC20.06■□□□□ 0.8
Scn7aB1AYL1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn7aB1AYL1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scn7aB1AYL1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn7aB1AYL1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
Scn7aB1AYL1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn7aB1AYL1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Scn7aB1AYL1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn7aB1AYL1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn7aB1AYL1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scn7aB1AYL1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Scn7aB1AYL1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.05■□□□□ 0.8
Scn7aB1AYL1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn7aB1AYL1 Gm23547-201ENSMUST00000158210 271 ntBASIC20.05■□□□□ 0.8
Scn7aB1AYL1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC20.05■□□□□ 0.8
Scn7aB1AYL1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scn7aB1AYL1 Gm43767-201ENSMUST00000198933 381 ntBASIC20.05■□□□□ 0.8
Scn7aB1AYL1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scn7aB1AYL1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC20.05■□□□□ 0.8
Scn7aB1AYL1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn7aB1AYL1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn7aB1AYL1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn7aB1AYL1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.05■□□□□ 0.8
Scn7aB1AYL1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scn7aB1AYL1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Scn7aB1AYL1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn7aB1AYL1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scn7aB1AYL1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC20.04■□□□□ 0.8
Scn7aB1AYL1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scn7aB1AYL1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC20.04■□□□□ 0.8
Scn7aB1AYL1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC20.04■□□□□ 0.8
Scn7aB1AYL1 CT010506.4-201ENSMUST00000225457 351 ntBASIC20.04■□□□□ 0.8
Scn7aB1AYL1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn7aB1AYL1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC20.04■□□□□ 0.8
Scn7aB1AYL1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn7aB1AYL1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn7aB1AYL1 Gm42934-201ENSMUST00000196920 1345 ntBASIC20.04■□□□□ 0.8
Scn7aB1AYL1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Scn7aB1AYL1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn7aB1AYL1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scn7aB1AYL1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scn7aB1AYL1 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.04■□□□□ 0.8
Scn7aB1AYL1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scn7aB1AYL1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn7aB1AYL1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn7aB1AYL1 Gm24158-201ENSMUST00000175263 71 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms