Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gm11452-201ENSMUST00000122376 690 ntBASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13n-1A0A0G2JEU8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13n-1A0A0G2JEU8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms