Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-1A0A075B699 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav9d-1A0A075B699 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav9d-1A0A075B699 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Mir770-201ENSMUST00000103252 94 ntBASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Gm44430-201ENSMUST00000203376 995 ntBASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav9d-1A0A075B699 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms