Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herpud1Q9JJK5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herpud1Q9JJK5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herpud1Q9JJK5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Herpud1Q9JJK5 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herpud1Q9JJK5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Herpud1Q9JJK5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Herpud1Q9JJK5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Herpud1Q9JJK5 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Mir770-201ENSMUST00000103252 94 ntBASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Herpud1Q9JJK5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Asic1-205ENSMUST00000228185 1818 ntBASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Gm10013-201ENSMUST00000106074 672 ntBASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Herpud1Q9JJK5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms