Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Tubb3Q9ERD7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.64■□□□□ 0.09
Tubb3Q9ERD7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubb3Q9ERD7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubb3Q9ERD7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubb3Q9ERD7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tubb3Q9ERD7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tubb3Q9ERD7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Tubb3Q9ERD7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.64■□□□□ 0.09
Tubb3Q9ERD7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.64■□□□□ 0.09
Tubb3Q9ERD7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.64■□□□□ 0.09
Tubb3Q9ERD7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubb3Q9ERD7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.64■□□□□ 0.09
Tubb3Q9ERD7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tubb3Q9ERD7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tubb3Q9ERD7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubb3Q9ERD7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubb3Q9ERD7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubb3Q9ERD7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tubb3Q9ERD7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Tubb3Q9ERD7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Gm12895-201ENSMUST00000122214 226 ntBASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tubb3Q9ERD7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.6■□□□□ 0.09
Tubb3Q9ERD7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms