Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm6659-201ENSMUST00000174752 547 ntBASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb3Q91XZ7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb3Q91XZ7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.77■□□□□ 0.12
Pcdhb3Q91XZ7 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhb3Q91XZ7 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.77■□□□□ 0.12
Pcdhb3Q91XZ7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb3Q91XZ7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb3Q91XZ7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb3Q91XZ7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb3Q91XZ7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhb3Q91XZ7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb3Q91XZ7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb3Q91XZ7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb3Q91XZ7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Pcdhb3Q91XZ7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb3Q91XZ7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb3Q91XZ7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb3Q91XZ7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.77■□□□□ 0.11
Pcdhb3Q91XZ7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb3Q91XZ7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
Pcdhb3Q91XZ7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Pcdhb3Q91XZ7 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Pcdhb3Q91XZ7 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb3Q91XZ7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb3Q91XZ7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.77■□□□□ 0.11
Pcdhb3Q91XZ7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Pcdhb3Q91XZ7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb3Q91XZ7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb3Q91XZ7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Pcdhb3Q91XZ7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb3Q91XZ7 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb3Q91XZ7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Gm18032-201ENSMUST00000222541 538 ntBASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 AC132260.2-201ENSMUST00000224482 344 ntBASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhb3Q91XZ7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Il3ra-202ENSMUST00000223589 738 ntBASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms