Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Gm6257-201ENSMUST00000163864 910 ntBASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Gm6345-202ENSMUST00000180900 204 ntBASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps39Q8R5L3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps39Q8R5L3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps39Q8R5L3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps39Q8R5L3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps39Q8R5L3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Vps39Q8R5L3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps39Q8R5L3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Vps39Q8R5L3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps39Q8R5L3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Vps39Q8R5L3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps39Q8R5L3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps39Q8R5L3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps39Q8R5L3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps39Q8R5L3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.77■□□□□ 0.12
Vps39Q8R5L3 Gm17808-201ENSMUST00000200859 894 ntBASIC15.77■□□□□ 0.12
Vps39Q8R5L3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps39Q8R5L3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Vps39Q8R5L3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps39Q8R5L3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps39Q8R5L3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Vps39Q8R5L3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps39Q8R5L3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps39Q8R5L3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps39Q8R5L3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Gm29518-201ENSMUST00000190858 372 ntBASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms