Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vopp1Q8R1C3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.58■□□□□ 0.24
Vopp1Q8R1C3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Vopp1Q8R1C3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vopp1Q8R1C3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vopp1Q8R1C3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vopp1Q8R1C3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vopp1Q8R1C3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vopp1Q8R1C3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vopp1Q8R1C3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Mir1895-201ENSMUST00000122615 79 ntBASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Auts2-212ENSMUST00000178555 309 ntBASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.56■□□□□ 0.24
Vopp1Q8R1C3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Gm2272-201ENSMUST00000194903 582 ntBASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Gm44335-201ENSMUST00000196879 141 ntBASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Gm44297-201ENSMUST00000198304 141 ntBASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Gm44346-201ENSMUST00000198851 141 ntBASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vopp1Q8R1C3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vopp1Q8R1C3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vopp1Q8R1C3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vopp1Q8R1C3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vopp1Q8R1C3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vopp1Q8R1C3 Gm11025-201ENSMUST00000140773 466 ntBASIC16.54■□□□□ 0.24
Vopp1Q8R1C3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.54■□□□□ 0.24
Vopp1Q8R1C3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.54■□□□□ 0.24
Vopp1Q8R1C3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.54■□□□□ 0.24
Vopp1Q8R1C3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vopp1Q8R1C3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vopp1Q8R1C3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vopp1Q8R1C3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vopp1Q8R1C3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vopp1Q8R1C3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vopp1Q8R1C3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vopp1Q8R1C3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vopp1Q8R1C3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vopp1Q8R1C3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.53■□□□□ 0.24
Vopp1Q8R1C3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms