Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Shtn1Q8K2Q9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Shtn1Q8K2Q9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Shtn1Q8K2Q9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shtn1Q8K2Q9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Gm43474-201ENSMUST00000196415 774 ntBASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shtn1Q8K2Q9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
Shtn1Q8K2Q9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
Shtn1Q8K2Q9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Gm18489-201ENSMUST00000172565 551 ntBASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms