Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim68Q8K243 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.08■□□□□ 0.33
Trim68Q8K243 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim68Q8K243 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim68Q8K243 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Trim68Q8K243 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim68Q8K243 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim68Q8K243 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim68Q8K243 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.08■□□□□ 0.32
Trim68Q8K243 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.08■□□□□ 0.32
Trim68Q8K243 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim68Q8K243 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim68Q8K243 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim68Q8K243 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim68Q8K243 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim68Q8K243 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim68Q8K243 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim68Q8K243 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim68Q8K243 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trim68Q8K243 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim68Q8K243 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trim68Q8K243 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim68Q8K243 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim68Q8K243 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.07■□□□□ 0.32
Trim68Q8K243 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trim68Q8K243 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim68Q8K243 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim68Q8K243 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim68Q8K243 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim68Q8K243 Gm11780-201ENSMUST00000136880 516 ntBASIC17.07■□□□□ 0.32
Trim68Q8K243 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.07■□□□□ 0.32
Trim68Q8K243 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.07■□□□□ 0.32
Trim68Q8K243 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.07■□□□□ 0.32
Trim68Q8K243 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.07■□□□□ 0.32
Trim68Q8K243 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim68Q8K243 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim68Q8K243 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim68Q8K243 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trim68Q8K243 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim68Q8K243 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trim68Q8K243 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim68Q8K243 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.06■□□□□ 0.32
Trim68Q8K243 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim68Q8K243 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim68Q8K243 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Trim68Q8K243 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Trim68Q8K243 Gm4459-201ENSMUST00000118750 468 ntBASIC17.06■□□□□ 0.32
Trim68Q8K243 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Trim68Q8K243 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Trim68Q8K243 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.06■□□□□ 0.32
Trim68Q8K243 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.06■□□□□ 0.32
Trim68Q8K243 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim68Q8K243 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim68Q8K243 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim68Q8K243 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim68Q8K243 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim68Q8K243 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim68Q8K243 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim68Q8K243 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.05■□□□□ 0.32
Trim68Q8K243 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim68Q8K243 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim68Q8K243 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim68Q8K243 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim68Q8K243 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms