Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm9013-201ENSMUST00000132939 882 ntBASIC17.2■□□□□ 0.34
Sox30Q8CGW4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sox30Q8CGW4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sox30Q8CGW4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox30Q8CGW4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Sox30Q8CGW4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sox30Q8CGW4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox30Q8CGW4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox30Q8CGW4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sox30Q8CGW4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox30Q8CGW4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox30Q8CGW4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Gm6433-201ENSMUST00000118634 875 ntBASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox30Q8CGW4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sox30Q8CGW4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Gm13312-201ENSMUST00000119631 718 ntBASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox30Q8CGW4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sox30Q8CGW4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms