Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trim6Q8BGE7 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Gm10566-201ENSMUST00000086739 996 ntBASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim6Q8BGE7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim6Q8BGE7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim6Q8BGE7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms