Protein–RNA interactions for Protein: Q8BG41

Psmb11, Proteasome subunit beta type-11, mousemouse

Predictions only

Length 302 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmb11Q8BG41 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Psmb11Q8BG41 Gm14026-201ENSMUST00000120625 1789 ntBASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Mir770-201ENSMUST00000103252 94 ntBASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.56□□□□□ -0.56
Psmb11Q8BG41 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Psmb11Q8BG41 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Psmb11Q8BG41 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Psmb11Q8BG41 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Psmb11Q8BG41 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Psmb11Q8BG41 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Psmb11Q8BG41 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Psmb11Q8BG41 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.54□□□□□ -0.56
Psmb11Q8BG41 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Psmb11Q8BG41 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Psmb11Q8BG41 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Psmb11Q8BG41 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Psmb11Q8BG41 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Psmb11Q8BG41 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Psmb11Q8BG41 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms