Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CtifQ6PEE2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CtifQ6PEE2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.84■□□□□ 0.29
CtifQ6PEE2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.84■□□□□ 0.29
CtifQ6PEE2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CtifQ6PEE2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CtifQ6PEE2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CtifQ6PEE2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CtifQ6PEE2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CtifQ6PEE2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CtifQ6PEE2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CtifQ6PEE2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CtifQ6PEE2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.84■□□□□ 0.29
CtifQ6PEE2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CtifQ6PEE2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CtifQ6PEE2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CtifQ6PEE2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CtifQ6PEE2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtifQ6PEE2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CtifQ6PEE2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtifQ6PEE2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtifQ6PEE2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtifQ6PEE2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CtifQ6PEE2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CtifQ6PEE2 Gm42545-201ENSMUST00000202755 922 ntBASIC16.83■□□□□ 0.28
CtifQ6PEE2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtifQ6PEE2 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.83■□□□□ 0.28
CtifQ6PEE2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
CtifQ6PEE2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CtifQ6PEE2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CtifQ6PEE2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtifQ6PEE2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.83■□□□□ 0.28
CtifQ6PEE2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtifQ6PEE2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtifQ6PEE2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtifQ6PEE2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtifQ6PEE2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CtifQ6PEE2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.83■□□□□ 0.28
CtifQ6PEE2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CtifQ6PEE2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.82■□□□□ 0.28
CtifQ6PEE2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtifQ6PEE2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CtifQ6PEE2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CtifQ6PEE2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Gm8520-201ENSMUST00000186517 868 ntBASIC16.81■□□□□ 0.28
CtifQ6PEE2 Rab3c-203ENSMUST00000224180 967 ntBASIC16.81■□□□□ 0.28
CtifQ6PEE2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.81■□□□□ 0.28
CtifQ6PEE2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CtifQ6PEE2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.81■□□□□ 0.28
CtifQ6PEE2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CtifQ6PEE2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CtifQ6PEE2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CtifQ6PEE2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.8■□□□□ 0.28
CtifQ6PEE2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.8■□□□□ 0.28
CtifQ6PEE2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.8■□□□□ 0.28
CtifQ6PEE2 Gm37292-201ENSMUST00000192062 758 ntBASIC16.8■□□□□ 0.28
CtifQ6PEE2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CtifQ6PEE2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.8■□□□□ 0.28
CtifQ6PEE2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CtifQ6PEE2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CtifQ6PEE2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CtifQ6PEE2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.8■□□□□ 0.28
CtifQ6PEE2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms