Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.14■□□□□ 0.17
Six1Q62231 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Six1Q62231 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Six1Q62231 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Six1Q62231 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Six1Q62231 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.13■□□□□ 0.17
Six1Q62231 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.13■□□□□ 0.17
Six1Q62231 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.13■□□□□ 0.17
Six1Q62231 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.13■□□□□ 0.17
Six1Q62231 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.13■□□□□ 0.17
Six1Q62231 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Gm45328-201ENSMUST00000210942 917 ntBASIC16.13■□□□□ 0.17
Six1Q62231 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.13■□□□□ 0.17
Six1Q62231 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Six1Q62231 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Six1Q62231 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Six1Q62231 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Six1Q62231 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.12■□□□□ 0.17
Six1Q62231 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.12■□□□□ 0.17
Six1Q62231 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Six1Q62231 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.12■□□□□ 0.17
Six1Q62231 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Six1Q62231 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Six1Q62231 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Six1Q62231 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six1Q62231 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six1Q62231 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six1Q62231 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six1Q62231 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Six1Q62231 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.11■□□□□ 0.17
Six1Q62231 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.11■□□□□ 0.17
Six1Q62231 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Six1Q62231 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Six1Q62231 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six1Q62231 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.11■□□□□ 0.17
Six1Q62231 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Six1Q62231 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six1Q62231 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six1Q62231 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.11■□□□□ 0.17
Six1Q62231 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six1Q62231 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Six1Q62231 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Six1Q62231 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six1Q62231 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Six1Q62231 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six1Q62231 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six1Q62231 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Six1Q62231 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six1Q62231 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms