Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Foxc1Q61572 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.58□□□□□ -0.56
Foxc1Q61572 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Foxc1Q61572 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Foxc1Q61572 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.58□□□□□ -0.56
Foxc1Q61572 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC11.58□□□□□ -0.56
Foxc1Q61572 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.58□□□□□ -0.56
Foxc1Q61572 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Foxc1Q61572 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.58□□□□□ -0.56
Foxc1Q61572 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Foxc1Q61572 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Foxc1Q61572 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Foxc1Q61572 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Foxc1Q61572 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Foxc1Q61572 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Foxc1Q61572 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Foxc1Q61572 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Foxc1Q61572 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Foxc1Q61572 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Foxc1Q61572 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Foxc1Q61572 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Foxc1Q61572 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.57□□□□□ -0.56
Foxc1Q61572 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.57□□□□□ -0.56
Foxc1Q61572 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.57□□□□□ -0.56
Foxc1Q61572 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Rprl3-201ENSMUST00000157400 290 ntBASIC11.57□□□□□ -0.56
Foxc1Q61572 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Foxc1Q61572 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Foxc1Q61572 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Foxc1Q61572 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.57□□□□□ -0.56
Foxc1Q61572 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Foxc1Q61572 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.56□□□□□ -0.56
Foxc1Q61572 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Foxc1Q61572 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.56□□□□□ -0.56
Foxc1Q61572 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Foxc1Q61572 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Foxc1Q61572 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Foxc1Q61572 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Foxc1Q61572 Olfr129-201ENSMUST00000122318 993 ntBASIC11.56□□□□□ -0.56
Foxc1Q61572 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms