Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ift88Q61371 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.45■□□□□ 0.38
Ift88Q61371 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.45■□□□□ 0.38
Ift88Q61371 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.45■□□□□ 0.38
Ift88Q61371 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ift88Q61371 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ift88Q61371 Mir6404-201ENSMUST00000183699 94 ntBASIC17.45■□□□□ 0.38
Ift88Q61371 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ift88Q61371 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift88Q61371 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ift88Q61371 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.44■□□□□ 0.38
Ift88Q61371 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Gm15565-201ENSMUST00000118890 427 ntBASIC17.44■□□□□ 0.38
Ift88Q61371 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.44■□□□□ 0.38
Ift88Q61371 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.44■□□□□ 0.38
Ift88Q61371 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.44■□□□□ 0.38
Ift88Q61371 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Ift88Q61371 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift88Q61371 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift88Q61371 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift88Q61371 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift88Q61371 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift88Q61371 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift88Q61371 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift88Q61371 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ift88Q61371 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ift88Q61371 Gm6257-201ENSMUST00000163864 910 ntBASIC17.43■□□□□ 0.38
Ift88Q61371 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ift88Q61371 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.43■□□□□ 0.38
Ift88Q61371 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift88Q61371 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift88Q61371 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.43■□□□□ 0.38
Ift88Q61371 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.43■□□□□ 0.38
Ift88Q61371 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ift88Q61371 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ift88Q61371 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ift88Q61371 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift88Q61371 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.43■□□□□ 0.38
Ift88Q61371 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift88Q61371 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift88Q61371 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.42■□□□□ 0.38
Ift88Q61371 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.42■□□□□ 0.38
Ift88Q61371 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Ift88Q61371 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Ift88Q61371 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms