Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf149Q3U2C5 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 BC037039-201ENSMUST00000192003 2205 ntBASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf149Q3U2C5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf149Q3U2C5 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf149Q3U2C5 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf149Q3U2C5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf149Q3U2C5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Rnf149Q3U2C5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf149Q3U2C5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf149Q3U2C5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf149Q3U2C5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf149Q3U2C5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf149Q3U2C5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf149Q3U2C5 Mir1668-201ENSMUST00000184114 107 ntBASIC14.15□□□□□ -0.14
Rnf149Q3U2C5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf149Q3U2C5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf149Q3U2C5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf149Q3U2C5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf149Q3U2C5 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf149Q3U2C5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf149Q3U2C5 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms