Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc1P97496 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc1P97496 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc1P97496 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc1P97496 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc1P97496 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc1P97496 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc1P97496 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcc1P97496 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.63■□□□□ 0.73
Smarcc1P97496 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcc1P97496 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.63■□□□□ 0.73
Smarcc1P97496 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcc1P97496 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.63■□□□□ 0.73
Smarcc1P97496 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcc1P97496 Mir449b-201ENSMUST00000104833 80 ntBASIC19.63■□□□□ 0.73
Smarcc1P97496 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcc1P97496 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcc1P97496 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcc1P97496 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC19.63■□□□□ 0.73
Smarcc1P97496 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.63■□□□□ 0.73
Smarcc1P97496 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcc1P97496 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcc1P97496 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Smarcc1P97496 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcc1P97496 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc1P97496 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Smarcc1P97496 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.62■□□□□ 0.73
Smarcc1P97496 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc1P97496 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc1P97496 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC19.62■□□□□ 0.73
Smarcc1P97496 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC19.62■□□□□ 0.73
Smarcc1P97496 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.62■□□□□ 0.73
Smarcc1P97496 Rpph1-201ENSMUST00000175096 319 ntBASIC19.62■□□□□ 0.73
Smarcc1P97496 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.62■□□□□ 0.73
Smarcc1P97496 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc1P97496 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Smarcc1P97496 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.62■□□□□ 0.73
Smarcc1P97496 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc1P97496 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc1P97496 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc1P97496 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc1P97496 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc1P97496 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc1P97496 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc1P97496 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc1P97496 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc1P97496 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc1P97496 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Smarcc1P97496 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC19.61■□□□□ 0.73
Smarcc1P97496 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC19.61■□□□□ 0.73
Smarcc1P97496 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Smarcc1P97496 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.61■□□□□ 0.73
Smarcc1P97496 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Smarcc1P97496 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc1P97496 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Smarcc1P97496 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.61■□□□□ 0.73
Smarcc1P97496 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc1P97496 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc1P97496 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcc1P97496 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Smarcc1P97496 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.6■□□□□ 0.73
Smarcc1P97496 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc1P97496 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc1P97496 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc1P97496 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc1P97496 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC19.6■□□□□ 0.73
Smarcc1P97496 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc1P97496 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc1P97496 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc1P97496 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.6■□□□□ 0.73
Smarcc1P97496 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcc1P97496 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Smarcc1P97496 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.6■□□□□ 0.73
Smarcc1P97496 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Smarcc1P97496 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 Gm9385-201ENSMUST00000117563 472 ntBASIC19.59■□□□□ 0.73
Smarcc1P97496 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC19.59■□□□□ 0.73
Smarcc1P97496 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC19.59■□□□□ 0.73
Smarcc1P97496 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC19.59■□□□□ 0.73
Smarcc1P97496 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.59■□□□□ 0.73
Smarcc1P97496 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.59■□□□□ 0.73
Smarcc1P97496 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC19.59■□□□□ 0.73
Smarcc1P97496 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Smarcc1P97496 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms