Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-3P97334 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-3P97334 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-3P97334 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC19.71■□□□□ 0.75
Nkx2-3P97334 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-3P97334 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-3P97334 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.71■□□□□ 0.75
Nkx2-3P97334 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC19.71■□□□□ 0.75
Nkx2-3P97334 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.71■□□□□ 0.75
Nkx2-3P97334 Gm10499-201ENSMUST00000174094 934 ntBASIC19.71■□□□□ 0.75
Nkx2-3P97334 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-3P97334 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-3P97334 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Nkx2-3P97334 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-3P97334 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-3P97334 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nkx2-3P97334 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Nkx2-3P97334 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-3P97334 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-3P97334 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.7■□□□□ 0.74
Nkx2-3P97334 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Mir6990-201ENSMUST00000183724 91 ntBASIC19.7■□□□□ 0.74
Nkx2-3P97334 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-3P97334 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.7■□□□□ 0.74
Nkx2-3P97334 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-3P97334 CT025626.1-201ENSMUST00000223735 1455 ntBASIC19.69■□□□□ 0.74
Nkx2-3P97334 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-3P97334 Gm12008-201ENSMUST00000117791 755 ntBASIC19.69■□□□□ 0.74
Nkx2-3P97334 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-3P97334 Gm18889-201ENSMUST00000174284 929 ntBASIC19.69■□□□□ 0.74
Nkx2-3P97334 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.69■□□□□ 0.74
Nkx2-3P97334 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-3P97334 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.69■□□□□ 0.74
Nkx2-3P97334 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nkx2-3P97334 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-3P97334 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.69■□□□□ 0.74
Nkx2-3P97334 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-3P97334 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.69■□□□□ 0.74
Nkx2-3P97334 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-3P97334 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-3P97334 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-3P97334 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-3P97334 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-3P97334 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-3P97334 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-3P97334 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Nkx2-3P97334 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-3P97334 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-3P97334 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Nkx2-3P97334 Gm5312-201ENSMUST00000203728 547 ntBASIC19.68■□□□□ 0.74
Nkx2-3P97334 AC159114.1-201ENSMUST00000220349 266 ntBASIC19.68■□□□□ 0.74
Nkx2-3P97334 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-3P97334 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-3P97334 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-3P97334 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-3P97334 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.68■□□□□ 0.74
Nkx2-3P97334 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Nkx2-3P97334 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Nkx2-3P97334 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.67■□□□□ 0.74
Nkx2-3P97334 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC19.67■□□□□ 0.74
Nkx2-3P97334 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nkx2-3P97334 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.67■□□□□ 0.74
Nkx2-3P97334 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-3P97334 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms