Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Lsm6P62313 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lsm6P62313 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.82□□□□□ -0.2
Lsm6P62313 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Lsm6P62313 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Lsm6P62313 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm6P62313 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Lsm6P62313 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
Lsm6P62313 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Lsm6P62313 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Lsm6P62313 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Lsm6P62313 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Lsm6P62313 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Lsm6P62313 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Lsm6P62313 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.81□□□□□ -0.2
Lsm6P62313 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Lsm6P62313 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Lsm6P62313 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.81□□□□□ -0.2
Lsm6P62313 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Lsm6P62313 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.81□□□□□ -0.2
Lsm6P62313 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm6P62313 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm6P62313 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm6P62313 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm6P62313 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.8□□□□□ -0.2
Lsm6P62313 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm6P62313 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Lsm6P62313 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Lsm6P62313 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Lsm6P62313 Gm14859-201ENSMUST00000117752 357 ntBASIC13.8□□□□□ -0.2
Lsm6P62313 Gm15372-201ENSMUST00000120729 834 ntBASIC13.8□□□□□ -0.2
Lsm6P62313 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Lsm6P62313 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.8□□□□□ -0.2
Lsm6P62313 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm6P62313 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.8□□□□□ -0.2
Lsm6P62313 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.8□□□□□ -0.2
Lsm6P62313 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.8□□□□□ -0.2
Lsm6P62313 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Lsm6P62313 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm6P62313 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.8□□□□□ -0.2
Lsm6P62313 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm6P62313 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Lsm6P62313 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Lsm6P62313 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm6P62313 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm6P62313 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm6P62313 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm6P62313 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm6P62313 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Lsm6P62313 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm6P62313 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.79□□□□□ -0.2
Lsm6P62313 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Gm15165-201ENSMUST00000118140 502 ntBASIC13.79□□□□□ -0.2
Lsm6P62313 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Lsm6P62313 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.79□□□□□ -0.2
Lsm6P62313 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.79□□□□□ -0.2
Lsm6P62313 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Lsm6P62313 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.79□□□□□ -0.2
Lsm6P62313 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.79□□□□□ -0.2
Lsm6P62313 App-207ENSMUST00000227737 2827 ntBASIC13.79□□□□□ -0.2
Lsm6P62313 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Lsm6P62313 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm6P62313 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms